Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.67■□□□□ 0.74
Lysmd1Q9D0E3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lysmd1Q9D0E3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lysmd1Q9D0E3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lysmd1Q9D0E3 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.67■□□□□ 0.74
Lysmd1Q9D0E3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Lysmd1Q9D0E3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC19.67■□□□□ 0.74
Lysmd1Q9D0E3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lysmd1Q9D0E3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Gm10418-201ENSMUST00000100943 576 ntBASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd1Q9D0E3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Gm1401-201ENSMUST00000122048 772 ntBASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Auts2-212ENSMUST00000178555 309 ntBASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd1Q9D0E3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lysmd1Q9D0E3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lysmd1Q9D0E3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Olfr129-201ENSMUST00000122318 993 ntBASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Gm7213-201ENSMUST00000215977 950 ntBASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd1Q9D0E3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lysmd1Q9D0E3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lysmd1Q9D0E3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lysmd1Q9D0E3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lysmd1Q9D0E3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.62■□□□□ 0.73
Lysmd1Q9D0E3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.62■□□□□ 0.73
Lysmd1Q9D0E3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.62■□□□□ 0.73
Lysmd1Q9D0E3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Gm43438-201ENSMUST00000198133 379 ntBASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd1Q9D0E3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Gm45328-201ENSMUST00000210942 917 ntBASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd1Q9D0E3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd1Q9D0E3 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd1Q9D0E3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd1Q9D0E3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.59■□□□□ 0.73
Lysmd1Q9D0E3 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd1Q9D0E3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.59■□□□□ 0.73
Lysmd1Q9D0E3 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms