Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Raet1eQ9CZQ6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Raet1eQ9CZQ6 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Tgds-204ENSMUST00000228543 1594 ntBASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Raet1eQ9CZQ6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Raet1eQ9CZQ6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Raet1eQ9CZQ6 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Raet1eQ9CZQ6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Raet1eQ9CZQ6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Raet1eQ9CZQ6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Raet1eQ9CZQ6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Raet1eQ9CZQ6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Raet1eQ9CZQ6 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Raet1eQ9CZQ6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms