Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Gm27405-201ENSMUST00000184201 112 ntBASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shmt2Q9CZN7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shmt2Q9CZN7 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.39■□□□□ 0.38
Shmt2Q9CZN7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shmt2Q9CZN7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Shmt2Q9CZN7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Gm7514-201ENSMUST00000209475 934 ntBASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shmt2Q9CZN7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Shmt2Q9CZN7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Gm13534-201ENSMUST00000121169 513 ntBASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Gm7291-201ENSMUST00000199147 382 ntBASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Shmt2Q9CZN7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shmt2Q9CZN7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shmt2Q9CZN7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shmt2Q9CZN7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms