Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc3Q9CWU5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Gm42569-201ENSMUST00000200539 472 ntBASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc3Q9CWU5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Khdc3Q9CWU5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Khdc3Q9CWU5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Khdc3Q9CWU5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Khdc3Q9CWU5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.52■□□□□ 0.39
Khdc3Q9CWU5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Khdc3Q9CWU5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Khdc3Q9CWU5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc3Q9CWU5 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc3Q9CWU5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Gm10849-201ENSMUST00000100397 618 ntBASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Khdc3Q9CWU5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Khdc3Q9CWU5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc3Q9CWU5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Khdc3Q9CWU5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc3Q9CWU5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Khdc3Q9CWU5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc3Q9CWU5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc3Q9CWU5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc3Q9CWU5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc3Q9CWU5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc3Q9CWU5 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc3Q9CWU5 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc3Q9CWU5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Khdc3Q9CWU5 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms