Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TpbpbQ9CQC0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpbQ9CQC0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpbQ9CQC0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpbQ9CQC0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpbQ9CQC0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TpbpbQ9CQC0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TpbpbQ9CQC0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TpbpbQ9CQC0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Gm7860-201ENSMUST00000121190 879 ntBASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TpbpbQ9CQC0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TpbpbQ9CQC0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Gm12922-201ENSMUST00000120626 809 ntBASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Spcs1-204ENSMUST00000226782 949 ntBASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TpbpbQ9CQC0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TpbpbQ9CQC0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TpbpbQ9CQC0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TpbpbQ9CQC0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TpbpbQ9CQC0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TpbpbQ9CQC0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TpbpbQ9CQC0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TpbpbQ9CQC0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms