Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim33Q99PP7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim33Q99PP7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim33Q99PP7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Gm7290-201ENSMUST00000104990 617 ntBASIC18.03■□□□□ 0.48
Trim33Q99PP7 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Gm12933-201ENSMUST00000120203 872 ntBASIC18.03■□□□□ 0.48
Trim33Q99PP7 Gm12918-201ENSMUST00000120234 636 ntBASIC18.03■□□□□ 0.48
Trim33Q99PP7 Gm15710-201ENSMUST00000121821 636 ntBASIC18.03■□□□□ 0.48
Trim33Q99PP7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Gm5075-201ENSMUST00000196916 622 ntBASIC18.03■□□□□ 0.48
Trim33Q99PP7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.03■□□□□ 0.48
Trim33Q99PP7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.03■□□□□ 0.48
Trim33Q99PP7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim33Q99PP7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.02■□□□□ 0.48
Trim33Q99PP7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trim33Q99PP7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
Trim33Q99PP7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim33Q99PP7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim33Q99PP7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim33Q99PP7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim33Q99PP7 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.02■□□□□ 0.47
Trim33Q99PP7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim33Q99PP7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim33Q99PP7 Gm6211-202ENSMUST00000167849 925 ntBASIC18.01■□□□□ 0.47
Trim33Q99PP7 Mir5133-201ENSMUST00000174955 77 ntBASIC18.01■□□□□ 0.47
Trim33Q99PP7 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms