Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim8Q99PJ2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim8Q99PJ2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim8Q99PJ2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim8Q99PJ2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim8Q99PJ2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim8Q99PJ2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim8Q99PJ2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim8Q99PJ2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Trim8Q99PJ2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trim8Q99PJ2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim8Q99PJ2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim8Q99PJ2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim8Q99PJ2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.83■□□□□ 0.45
Trim8Q99PJ2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trim8Q99PJ2 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.83■□□□□ 0.44
Trim8Q99PJ2 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.83■□□□□ 0.44
Trim8Q99PJ2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim8Q99PJ2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim8Q99PJ2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim8Q99PJ2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim8Q99PJ2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim8Q99PJ2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim8Q99PJ2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim8Q99PJ2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Gm6139-201ENSMUST00000079261 882 ntBASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim8Q99PJ2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim8Q99PJ2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms