Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col25a1Q99MQ5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col25a1Q99MQ5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col25a1Q99MQ5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Gm18958-201ENSMUST00000174258 762 ntBASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.92■□□□□ 0.62
Col25a1Q99MQ5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col25a1Q99MQ5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col25a1Q99MQ5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.91■□□□□ 0.62
Col25a1Q99MQ5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.91■□□□□ 0.62
Col25a1Q99MQ5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.91■□□□□ 0.62
Col25a1Q99MQ5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.91■□□□□ 0.62
Col25a1Q99MQ5 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col25a1Q99MQ5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Col25a1Q99MQ5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Col25a1Q99MQ5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col25a1Q99MQ5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Col25a1Q99MQ5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col25a1Q99MQ5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col25a1Q99MQ5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col25a1Q99MQ5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col25a1Q99MQ5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col25a1Q99MQ5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Col25a1Q99MQ5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Col25a1Q99MQ5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Col25a1Q99MQ5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Col25a1Q99MQ5 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Col25a1Q99MQ5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Gm24589-201ENSMUST00000116692 94 ntBASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Gm7860-201ENSMUST00000121190 879 ntBASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Mir5130-201ENSMUST00000175160 84 ntBASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Gm22697-201ENSMUST00000175194 63 ntBASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Col25a1Q99MQ5 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col25a1Q99MQ5 Iqck-206ENSMUST00000208658 2891 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms