Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx6-1Q99MA9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Gm10013-201ENSMUST00000106074 672 ntBASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nkx6-1Q99MA9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.1■□□□□ 0.33
Nkx6-1Q99MA9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nkx6-1Q99MA9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-1Q99MA9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-1Q99MA9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.08■□□□□ 0.33
Nkx6-1Q99MA9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
Nkx6-1Q99MA9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-1Q99MA9 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nkx6-1Q99MA9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 AA414768-201ENSMUST00000121924 1257 ntBASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nkx6-1Q99MA9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Gm6345-202ENSMUST00000180900 204 ntBASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nkx6-1Q99MA9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Gm33142-201ENSMUST00000193913 867 ntBASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nkx6-1Q99MA9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nkx6-1Q99MA9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms