Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Col20a1Q923P0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Mir6982-201ENSMUST00000184354 68 ntBASIC21.59■■□□□ 1.05
Col20a1Q923P0 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.59■■□□□ 1.05
Col20a1Q923P0 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.59■■□□□ 1.05
Col20a1Q923P0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Col20a1Q923P0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col20a1Q923P0 Gm715-201ENSMUST00000117865 831 ntBASIC21.58■■□□□ 1.05
Col20a1Q923P0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.58■■□□□ 1.05
Col20a1Q923P0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col20a1Q923P0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col20a1Q923P0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Col20a1Q923P0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Col20a1Q923P0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col20a1Q923P0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.58■■□□□ 1.04
Col20a1Q923P0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col20a1Q923P0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col20a1Q923P0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Col20a1Q923P0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.57■■□□□ 1.04
Col20a1Q923P0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Col20a1Q923P0 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Col20a1Q923P0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col20a1Q923P0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col20a1Q923P0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col20a1Q923P0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col20a1Q923P0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col20a1Q923P0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.56■■□□□ 1.04
Col20a1Q923P0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Col20a1Q923P0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Col20a1Q923P0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.55■■□□□ 1.04
Col20a1Q923P0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Mir6349-201ENSMUST00000184059 97 ntBASIC21.55■■□□□ 1.04
Col20a1Q923P0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Gm18025-201ENSMUST00000221733 862 ntBASIC21.55■■□□□ 1.04
Col20a1Q923P0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Col20a1Q923P0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Col20a1Q923P0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col20a1Q923P0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col20a1Q923P0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Col20a1Q923P0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col20a1Q923P0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Col20a1Q923P0 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.53■■□□□ 1.04
Col20a1Q923P0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Col20a1Q923P0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Col20a1Q923P0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.53■■□□□ 1.04
Col20a1Q923P0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms