Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgc5Q91XW9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgc5Q91XW9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Gm44549-201ENSMUST00000208351 577 ntBASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgc5Q91XW9 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgc5Q91XW9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgc5Q91XW9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcdhgc5Q91XW9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcdhgc5Q91XW9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdhgc5Q91XW9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgc5Q91XW9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgc5Q91XW9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhgc5Q91XW9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhgc5Q91XW9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.77■□□□□ 0.91
Pcdhgc5Q91XW9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhgc5Q91XW9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Pcdhgc5Q91XW9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Gm18666-201ENSMUST00000190039 958 ntBASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhgc5Q91XW9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc5Q91XW9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc5Q91XW9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhgc5Q91XW9 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.74■□□□□ 0.91
Pcdhgc5Q91XW9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhgc5Q91XW9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms