Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.45■□□□□ 0.7
TraipQ8VIG6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TraipQ8VIG6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.44■□□□□ 0.7
TraipQ8VIG6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TraipQ8VIG6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TraipQ8VIG6 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TraipQ8VIG6 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TraipQ8VIG6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TraipQ8VIG6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TraipQ8VIG6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TraipQ8VIG6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TraipQ8VIG6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TraipQ8VIG6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TraipQ8VIG6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.42■□□□□ 0.7
TraipQ8VIG6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TraipQ8VIG6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Gm43183-201ENSMUST00000200632 547 ntBASIC19.41■□□□□ 0.7
TraipQ8VIG6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.41■□□□□ 0.7
TraipQ8VIG6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TraipQ8VIG6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TraipQ8VIG6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TraipQ8VIG6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TraipQ8VIG6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
TraipQ8VIG6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TraipQ8VIG6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Mir5122-201ENSMUST00000175004 89 ntBASIC19.39■□□□□ 0.69
TraipQ8VIG6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TraipQ8VIG6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TraipQ8VIG6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.38■□□□□ 0.69
TraipQ8VIG6 Gm37292-201ENSMUST00000192062 758 ntBASIC19.38■□□□□ 0.69
TraipQ8VIG6 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.38■□□□□ 0.69
TraipQ8VIG6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TraipQ8VIG6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TraipQ8VIG6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TraipQ8VIG6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TraipQ8VIG6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.37■□□□□ 0.69
TraipQ8VIG6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.37■□□□□ 0.69
TraipQ8VIG6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TraipQ8VIG6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms