Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hist3h2bbQ8CGP0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hist3h2bbQ8CGP0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hist3h2bbQ8CGP0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 AA386476-201ENSMUST00000098781 1665 ntBASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hist3h2bbQ8CGP0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hist3h2bbQ8CGP0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hist3h2bbQ8CGP0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms