Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ShfQ8CG80 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ShfQ8CG80 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.3■□□□□ 0.2
ShfQ8CG80 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ShfQ8CG80 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.3■□□□□ 0.2
ShfQ8CG80 Gm8969-201ENSMUST00000199694 526 ntBASIC16.3■□□□□ 0.2
ShfQ8CG80 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.3■□□□□ 0.2
ShfQ8CG80 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.3■□□□□ 0.2
ShfQ8CG80 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ShfQ8CG80 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ShfQ8CG80 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.29■□□□□ 0.2
ShfQ8CG80 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Gm9988-201ENSMUST00000069786 435 ntBASIC16.29■□□□□ 0.2
ShfQ8CG80 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ShfQ8CG80 Fst-202ENSMUST00000223640 2612 ntBASIC16.29■□□□□ 0.2
ShfQ8CG80 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.28■□□□□ 0.2
ShfQ8CG80 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ShfQ8CG80 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ShfQ8CG80 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.27■□□□□ 0.2
ShfQ8CG80 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.27■□□□□ 0.2
ShfQ8CG80 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ShfQ8CG80 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ShfQ8CG80 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShfQ8CG80 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ShfQ8CG80 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.27■□□□□ 0.19
ShfQ8CG80 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ShfQ8CG80 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ShfQ8CG80 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.26■□□□□ 0.19
ShfQ8CG80 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
ShfQ8CG80 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.26■□□□□ 0.19
ShfQ8CG80 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.26■□□□□ 0.19
ShfQ8CG80 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ShfQ8CG80 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.25■□□□□ 0.19
ShfQ8CG80 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ShfQ8CG80 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
ShfQ8CG80 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShfQ8CG80 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.25■□□□□ 0.19
ShfQ8CG80 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShfQ8CG80 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ShfQ8CG80 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.25■□□□□ 0.19
ShfQ8CG80 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShfQ8CG80 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShfQ8CG80 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms