Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.58■□□□□ 0.57
Rfx6Q8C7R7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx6Q8C7R7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx6Q8C7R7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx6Q8C7R7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx6Q8C7R7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rfx6Q8C7R7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Rfx6Q8C7R7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rfx6Q8C7R7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Rfx6Q8C7R7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Fst-202ENSMUST00000223640 2612 ntBASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rfx6Q8C7R7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Gm43060-201ENSMUST00000200621 289 ntBASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.54■□□□□ 0.56
Rfx6Q8C7R7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfx6Q8C7R7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx6Q8C7R7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx6Q8C7R7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx6Q8C7R7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx6Q8C7R7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx6Q8C7R7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx6Q8C7R7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx6Q8C7R7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfx6Q8C7R7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms