Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cstf2tQ8C7E9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.66■□□□□ 0.58
Cstf2tQ8C7E9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cstf2tQ8C7E9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cstf2tQ8C7E9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cstf2tQ8C7E9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cstf2tQ8C7E9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cstf2tQ8C7E9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cstf2tQ8C7E9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cstf2tQ8C7E9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cstf2tQ8C7E9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf2tQ8C7E9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Gm5867-201ENSMUST00000063197 592 ntBASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cstf2tQ8C7E9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Gm10013-201ENSMUST00000106074 672 ntBASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf2tQ8C7E9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf2tQ8C7E9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms