Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sh3rf3Q8C120 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3rf3Q8C120 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3rf3Q8C120 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Fst-202ENSMUST00000223640 2612 ntBASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Sh3rf3Q8C120 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Gm37179-201ENSMUST00000194862 823 ntBASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3rf3Q8C120 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sh3rf3Q8C120 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sh3rf3Q8C120 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh3rf3Q8C120 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms