Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfsfm13Q8BXS2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfsfm13Q8BXS2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tnfsfm13Q8BXS2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Gm13146-201ENSMUST00000118508 780 ntBASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfsfm13Q8BXS2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Tnfsfm13Q8BXS2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfsfm13Q8BXS2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfsfm13Q8BXS2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfsfm13Q8BXS2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tnfsfm13Q8BXS2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Tnfsfm13Q8BXS2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Tnfsfm13Q8BXS2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tnfsfm13Q8BXS2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsfm13Q8BXS2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsfm13Q8BXS2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.25■□□□□ 0.19
Tnfsfm13Q8BXS2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsfm13Q8BXS2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsfm13Q8BXS2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsfm13Q8BXS2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Tnfsfm13Q8BXS2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tnfsfm13Q8BXS2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms