Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Suds3Q8BR65 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Suds3Q8BR65 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.68■□□□□ 0.58
Suds3Q8BR65 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Suds3Q8BR65 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.68■□□□□ 0.58
Suds3Q8BR65 Gm13146-201ENSMUST00000118508 780 ntBASIC18.68■□□□□ 0.58
Suds3Q8BR65 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Suds3Q8BR65 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Suds3Q8BR65 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Suds3Q8BR65 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Suds3Q8BR65 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Suds3Q8BR65 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Suds3Q8BR65 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.67■□□□□ 0.58
Suds3Q8BR65 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Suds3Q8BR65 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.66■□□□□ 0.58
Suds3Q8BR65 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Gm10602-201ENSMUST00000098239 609 ntBASIC18.66■□□□□ 0.58
Suds3Q8BR65 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Suds3Q8BR65 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Nespas-201ENSMUST00000143738 1083 ntBASIC18.65■□□□□ 0.58
Suds3Q8BR65 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.65■□□□□ 0.58
Suds3Q8BR65 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Suds3Q8BR65 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Suds3Q8BR65 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Suds3Q8BR65 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Suds3Q8BR65 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Suds3Q8BR65 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.64■□□□□ 0.57
Suds3Q8BR65 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Suds3Q8BR65 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms