Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ssx9Q6XAS3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssx9Q6XAS3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ssx9Q6XAS3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssx9Q6XAS3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Nespas-201ENSMUST00000143738 1083 ntBASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ssx9Q6XAS3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ssx9Q6XAS3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ssx9Q6XAS3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ssx9Q6XAS3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Ssx9Q6XAS3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Gm10033-202ENSMUST00000211874 928 ntBASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ssx9Q6XAS3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ssx9Q6XAS3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ssx9Q6XAS3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms