Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.38■□□□□ 0.05
Rif1Q6PR54 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.38■□□□□ 0.05
Rif1Q6PR54 Gm10138-203ENSMUST00000206952 366 ntBASIC15.38■□□□□ 0.05
Rif1Q6PR54 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rif1Q6PR54 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Gm38027-201ENSMUST00000192315 235 ntBASIC15.37■□□□□ 0.05
Rif1Q6PR54 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.37■□□□□ 0.05
Rif1Q6PR54 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Gm27357-201ENSMUST00000183754 135 ntBASIC15.37■□□□□ 0.05
Rif1Q6PR54 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.37■□□□□ 0.05
Rif1Q6PR54 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.37■□□□□ 0.05
Rif1Q6PR54 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rif1Q6PR54 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rif1Q6PR54 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.35■□□□□ 0.05
Rif1Q6PR54 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.35■□□□□ 0.05
Rif1Q6PR54 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rif1Q6PR54 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rif1Q6PR54 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rif1Q6PR54 AA386476-201ENSMUST00000098781 1665 ntBASIC15.35■□□□□ 0.05
Rif1Q6PR54 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.35■□□□□ 0.05
Rif1Q6PR54 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rif1Q6PR54 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rif1Q6PR54 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rif1Q6PR54 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Gm23935-201ENSMUST00000102303 57 ntBASIC15.34■□□□□ 0.05
Rif1Q6PR54 Gm24270-201ENSMUST00000102326 57 ntBASIC15.34■□□□□ 0.05
Rif1Q6PR54 Gm8097-201ENSMUST00000117903 829 ntBASIC15.34■□□□□ 0.05
Rif1Q6PR54 Gm24245-201ENSMUST00000157318 57 ntBASIC15.34■□□□□ 0.05
Rif1Q6PR54 Gm27742-201ENSMUST00000184667 60 ntBASIC15.34■□□□□ 0.05
Rif1Q6PR54 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.34■□□□□ 0.05
Rif1Q6PR54 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.34■□□□□ 0.05
Rif1Q6PR54 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rif1Q6PR54 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.33■□□□□ 0.05
Rif1Q6PR54 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rif1Q6PR54 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Rif1Q6PR54 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Gm16061-201ENSMUST00000122167 857 ntBASIC15.33■□□□□ 0.04
Rif1Q6PR54 Olfr129-201ENSMUST00000122318 993 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms