Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Gm18115-201ENSMUST00000221209 621 ntBASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cachd1Q6PDJ1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.39■□□□□ 0.53
Cachd1Q6PDJ1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cachd1Q6PDJ1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Gm18733-201ENSMUST00000173950 856 ntBASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Flg-201ENSMUST00000050758 1488 ntBASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cachd1Q6PDJ1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cachd1Q6PDJ1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Gm27463-201ENSMUST00000183569 57 ntBASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Gm2213-201ENSMUST00000197485 688 ntBASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Gm18206-201ENSMUST00000207027 926 ntBASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cachd1Q6PDJ1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms