Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sp140Q6NSQ5 Gm18284-201ENSMUST00000172604 624 ntBASIC18.52■□□□□ 0.56
Sp140Q6NSQ5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.52■□□□□ 0.56
Sp140Q6NSQ5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.52■□□□□ 0.56
Sp140Q6NSQ5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sp140Q6NSQ5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sp140Q6NSQ5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sp140Q6NSQ5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sp140Q6NSQ5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Gm10849-201ENSMUST00000100397 618 ntBASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sp140Q6NSQ5 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sp140Q6NSQ5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.46■□□□□ 0.55
Sp140Q6NSQ5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sp140Q6NSQ5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.44■□□□□ 0.54
Sp140Q6NSQ5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms