Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.5■□□□□ 0.39
Sdc3Q64519 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Sdc3Q64519 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Sdc3Q64519 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Grk6-206ENSMUST00000224995 2971 ntBASIC17.5■□□□□ 0.39
Sdc3Q64519 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sdc3Q64519 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sdc3Q64519 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sdc3Q64519 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdc3Q64519 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Sdc3Q64519 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.49■□□□□ 0.39
Sdc3Q64519 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdc3Q64519 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sdc3Q64519 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.49■□□□□ 0.39
Sdc3Q64519 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Gm27275-201ENSMUST00000184318 272 ntBASIC17.48■□□□□ 0.39
Sdc3Q64519 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Sdc3Q64519 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.48■□□□□ 0.39
Sdc3Q64519 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc3Q64519 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.47■□□□□ 0.39
Sdc3Q64519 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Sdc3Q64519 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.47■□□□□ 0.39
Sdc3Q64519 Gm37856-201ENSMUST00000191634 999 ntBASIC17.47■□□□□ 0.39
Sdc3Q64519 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.47■□□□□ 0.39
Sdc3Q64519 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.47■□□□□ 0.39
Sdc3Q64519 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sdc3Q64519 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.47■□□□□ 0.39
Sdc3Q64519 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Sdc3Q64519 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc3Q64519 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Sdc3Q64519 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sdc3Q64519 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
Sdc3Q64519 Gm12896-201ENSMUST00000118430 226 ntBASIC17.46■□□□□ 0.39
Sdc3Q64519 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.46■□□□□ 0.39
Sdc3Q64519 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Sdc3Q64519 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.46■□□□□ 0.39
Sdc3Q64519 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.46■□□□□ 0.39
Sdc3Q64519 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc3Q64519 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Sdc3Q64519 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc3Q64519 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc3Q64519 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc3Q64519 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sdc3Q64519 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc3Q64519 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc3Q64519 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc3Q64519 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc3Q64519 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.44■□□□□ 0.38
Sdc3Q64519 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms