Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sox17Q61473 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox17Q61473 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox17Q61473 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.12■□□□□ 0.33
Sox17Q61473 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.12■□□□□ 0.33
Sox17Q61473 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox17Q61473 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox17Q61473 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox17Q61473 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox17Q61473 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sox17Q61473 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sox17Q61473 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.12■□□□□ 0.33
Sox17Q61473 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sox17Q61473 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sox17Q61473 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sox17Q61473 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.11■□□□□ 0.33
Sox17Q61473 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sox17Q61473 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sox17Q61473 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.1■□□□□ 0.33
Sox17Q61473 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sox17Q61473 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.1■□□□□ 0.33
Sox17Q61473 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sox17Q61473 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox17Q61473 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox17Q61473 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox17Q61473 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Gm45102-201ENSMUST00000207427 857 ntBASIC17.09■□□□□ 0.33
Sox17Q61473 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sox17Q61473 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox17Q61473 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sox17Q61473 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox17Q61473 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.08■□□□□ 0.32
Sox17Q61473 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.08■□□□□ 0.32
Sox17Q61473 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.08■□□□□ 0.32
Sox17Q61473 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Sox17Q61473 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.08■□□□□ 0.32
Sox17Q61473 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sox17Q61473 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Sox17Q61473 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox17Q61473 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox17Q61473 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox17Q61473 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Sox17Q61473 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.07■□□□□ 0.32
Sox17Q61473 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sox17Q61473 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sox17Q61473 Gm43137-201ENSMUST00000198052 594 ntBASIC17.07■□□□□ 0.32
Sox17Q61473 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox17Q61473 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms