Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccne1Q61457 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Ccne1Q61457 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Ccne1Q61457 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccne1Q61457 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Ccne1Q61457 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccne1Q61457 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccne1Q61457 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccne1Q61457 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccne1Q61457 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ccne1Q61457 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC23.86■■□□□ 1.41
Ccne1Q61457 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
Ccne1Q61457 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccne1Q61457 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccne1Q61457 Gm30025-201ENSMUST00000218555 728 ntBASIC23.85■■□□□ 1.41
Ccne1Q61457 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ccne1Q61457 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ccne1Q61457 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Gm7712-202ENSMUST00000222331 1510 ntBASIC23.84■■□□□ 1.41
Ccne1Q61457 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Ccne1Q61457 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC23.84■■□□□ 1.41
Ccne1Q61457 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC23.84■■□□□ 1.41
Ccne1Q61457 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccne1Q61457 Gm8668-201ENSMUST00000120559 1447 ntBASIC23.84■■□□□ 1.41
Ccne1Q61457 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Ccne1Q61457 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC23.83■■□□□ 1.41
Ccne1Q61457 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Ccne1Q61457 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccne1Q61457 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.83■■□□□ 1.41
Ccne1Q61457 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccne1Q61457 AC156016.1-201ENSMUST00000227190 1035 ntBASIC23.83■■□□□ 1.41
Ccne1Q61457 Otx2os1-204ENSMUST00000227221 751 ntBASIC23.83■■□□□ 1.41
Ccne1Q61457 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccne1Q61457 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccne1Q61457 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ccne1Q61457 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccne1Q61457 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccne1Q61457 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccne1Q61457 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccne1Q61457 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
Ccne1Q61457 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccne1Q61457 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
Ccne1Q61457 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
Ccne1Q61457 Rncr4-201ENSMUST00000194541 2234 ntBASIC23.82■■□□□ 1.4
Ccne1Q61457 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccne1Q61457 Gm12382-201ENSMUST00000122005 922 ntBASIC23.82■■□□□ 1.4
Ccne1Q61457 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ccne1Q61457 Mir6349-201ENSMUST00000184059 97 ntBASIC23.82■■□□□ 1.4
Ccne1Q61457 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccne1Q61457 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ccne1Q61457 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccne1Q61457 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccne1Q61457 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ccne1Q61457 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Ccne1Q61457 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC23.81■■□□□ 1.4
Ccne1Q61457 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.81■■□□□ 1.4
Ccne1Q61457 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccne1Q61457 Gm10654-201ENSMUST00000098653 1633 ntBASIC23.81■■□□□ 1.4
Ccne1Q61457 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccne1Q61457 Notumos-201ENSMUST00000151998 2659 ntBASIC23.8■■□□□ 1.4
Ccne1Q61457 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccne1Q61457 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.8■■□□□ 1.4
Ccne1Q61457 Gm11539-201ENSMUST00000119837 557 ntBASIC23.8■■□□□ 1.4
Ccne1Q61457 Gm13436-201ENSMUST00000120418 567 ntBASIC23.8■■□□□ 1.4
Ccne1Q61457 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ccne1Q61457 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccne1Q61457 AC166341.7-201ENSMUST00000221698 126 ntBASIC23.8■■□□□ 1.4
Ccne1Q61457 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccne1Q61457 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccne1Q61457 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccne1Q61457 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccne1Q61457 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccne1Q61457 Gm13559-201ENSMUST00000120476 863 ntBASIC23.79■■□□□ 1.4
Ccne1Q61457 Gm3375-201ENSMUST00000203929 796 ntBASIC23.79■■□□□ 1.4
Ccne1Q61457 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.79■■□□□ 1.4
Ccne1Q61457 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccne1Q61457 Odf3b-204ENSMUST00000227834 930 ntBASIC23.79■■□□□ 1.4
Ccne1Q61457 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ccne1Q61457 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccne1Q61457 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccne1Q61457 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms