Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Gm9870-201ENSMUST00000063874 645 ntBASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pabpn1lQ5XFR0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pabpn1lQ5XFR0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Gm13241-201ENSMUST00000094493 780 ntBASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pabpn1lQ5XFR0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pabpn1lQ5XFR0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pabpn1lQ5XFR0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pabpn1lQ5XFR0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pabpn1lQ5XFR0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pabpn1lQ5XFR0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Gm9847-201ENSMUST00000052528 599 ntBASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Pabpn1lQ5XFR0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pabpn1lQ5XFR0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Gm8969-201ENSMUST00000199694 526 ntBASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pabpn1lQ5XFR0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1lQ5XFR0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1lQ5XFR0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Pabpn1lQ5XFR0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.23■□□□□ 0.51
Pabpn1lQ5XFR0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pabpn1lQ5XFR0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Pabpn1lQ5XFR0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms