Protein–RNA interactions for Protein: Q5SV66

Ccdc42, Coiled-coil domain-containing protein 42, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42Q5SV66 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Gm21956-201ENSMUST00000179946 522 ntBASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc42Q5SV66 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.7■□□□□ 0.74
Ccdc42Q5SV66 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc42Q5SV66 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc42Q5SV66 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc42Q5SV66 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Fst-202ENSMUST00000223640 2612 ntBASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc42Q5SV66 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc42Q5SV66 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc42Q5SV66 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc42Q5SV66 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc42Q5SV66 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc42Q5SV66 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc42Q5SV66 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc42Q5SV66 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc42Q5SV66 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc42Q5SV66 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc42Q5SV66 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms