Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Mir5122-201ENSMUST00000175004 89 ntBASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Gm38285-201ENSMUST00000192928 922 ntBASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-2Q5R1I4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Gm15375-201ENSMUST00000119510 849 ntBASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Gm43183-201ENSMUST00000200632 547 ntBASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-2Q5R1I4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav6-2Q5R1I4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Gm5417-201ENSMUST00000079706 384 ntBASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-2Q5R1I4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Gm18025-201ENSMUST00000221733 862 ntBASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-2Q5R1I4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-2Q5R1I4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-2Q5R1I4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-2Q5R1I4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms