Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Grk6-206ENSMUST00000224995 2971 ntBASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Nespas-201ENSMUST00000143738 1083 ntBASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Gm7514-201ENSMUST00000209475 934 ntBASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5d-4Q5R1F6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5d-4Q5R1F6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5d-4Q5R1F6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5d-4Q5R1F6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5d-4Q5R1F6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5d-4Q5R1F6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Rarb-207ENSMUST00000225921 2756 ntBASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Gm18284-201ENSMUST00000172604 624 ntBASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Fst-202ENSMUST00000223640 2612 ntBASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5d-4Q5R1F6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav5d-4Q5R1F6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms