Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav3-3Q5R1C3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-3Q5R1C3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-3Q5R1C3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-3Q5R1C3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.22
Trav3-3Q5R1C3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav3-3Q5R1C3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-3Q5R1C3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-3Q5R1C3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav3-3Q5R1C3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Gm13238-201ENSMUST00000117655 780 ntBASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Gm40881-201ENSMUST00000223397 166 ntBASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav3-3Q5R1C3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav3-3Q5R1C3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav3-3Q5R1C3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav3-3Q5R1C3 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms