Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Urb1Q571H0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Urb1Q571H0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Urb1Q571H0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Urb1Q571H0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.77■□□□□ 0.27
Urb1Q571H0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Urb1Q571H0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Urb1Q571H0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Urb1Q571H0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.77■□□□□ 0.27
Urb1Q571H0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Urb1Q571H0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Urb1Q571H0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Urb1Q571H0 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.76■□□□□ 0.27
Urb1Q571H0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Urb1Q571H0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Urb1Q571H0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Urb1Q571H0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Urb1Q571H0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.75■□□□□ 0.27
Urb1Q571H0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.75■□□□□ 0.27
Urb1Q571H0 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.75■□□□□ 0.27
Urb1Q571H0 Zfp783-201ENSMUST00000095946 670 ntBASIC16.75■□□□□ 0.27
Urb1Q571H0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Urb1Q571H0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Urb1Q571H0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Urb1Q571H0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Urb1Q571H0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Urb1Q571H0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.74■□□□□ 0.27
Urb1Q571H0 Gm42545-201ENSMUST00000202755 922 ntBASIC16.74■□□□□ 0.27
Urb1Q571H0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Urb1Q571H0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.73■□□□□ 0.27
Urb1Q571H0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.73■□□□□ 0.27
Urb1Q571H0 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.73■□□□□ 0.27
Urb1Q571H0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Urb1Q571H0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Urb1Q571H0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Urb1Q571H0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Urb1Q571H0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Urb1Q571H0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Ank2-226ENSMUST00000189368 339 ntBASIC16.72■□□□□ 0.27
Urb1Q571H0 Odf3b-204ENSMUST00000227834 930 ntBASIC16.72■□□□□ 0.27
Urb1Q571H0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Urb1Q571H0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Urb1Q571H0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Urb1Q571H0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Urb1Q571H0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms