Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Bdp1Q571C7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Bdp1Q571C7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Bdp1Q571C7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Bdp1Q571C7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Bdp1Q571C7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.64■□□□□ 0.57
Bdp1Q571C7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Bdp1Q571C7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Bdp1Q571C7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Bdp1Q571C7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Gm28659-201ENSMUST00000188013 759 ntBASIC18.63■□□□□ 0.57
Bdp1Q571C7 Gm38285-201ENSMUST00000192928 922 ntBASIC18.63■□□□□ 0.57
Bdp1Q571C7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Bdp1Q571C7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Gm18206-201ENSMUST00000207027 926 ntBASIC18.62■□□□□ 0.57
Bdp1Q571C7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.62■□□□□ 0.57
Bdp1Q571C7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Gm27357-201ENSMUST00000183754 135 ntBASIC18.61■□□□□ 0.57
Bdp1Q571C7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Bdp1Q571C7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Bdp1Q571C7 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.6■□□□□ 0.57
Bdp1Q571C7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Bdp1Q571C7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Bdp1Q571C7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Bdp1Q571C7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.6■□□□□ 0.57
Bdp1Q571C7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Bdp1Q571C7 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.6■□□□□ 0.57
Bdp1Q571C7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Bdp1Q571C7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Bdp1Q571C7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.6■□□□□ 0.57
Bdp1Q571C7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Bdp1Q571C7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Bdp1Q571C7 Gm27389-201ENSMUST00000183622 195 ntBASIC18.58■□□□□ 0.57
Bdp1Q571C7 Gm43347-201ENSMUST00000200226 580 ntBASIC18.58■□□□□ 0.57
Bdp1Q571C7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Bdp1Q571C7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Bdp1Q571C7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Bdp1Q571C7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Bdp1Q571C7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Bdp1Q571C7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bdp1Q571C7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bdp1Q571C7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.57■□□□□ 0.56
Bdp1Q571C7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.57■□□□□ 0.56
Bdp1Q571C7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bdp1Q571C7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Bdp1Q571C7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Bdp1Q571C7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 7.1 ms