Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxc4Q08624 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.58■□□□□ 0.41
Hoxc4Q08624 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc4Q08624 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc4Q08624 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc4Q08624 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc4Q08624 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc4Q08624 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxc4Q08624 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Gm715-201ENSMUST00000117865 831 ntBASIC17.58■□□□□ 0.4
Hoxc4Q08624 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Gm43183-201ENSMUST00000200632 547 ntBASIC17.58■□□□□ 0.4
Hoxc4Q08624 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxc4Q08624 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.57■□□□□ 0.4
Hoxc4Q08624 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Hoxc4Q08624 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.57■□□□□ 0.4
Hoxc4Q08624 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxc4Q08624 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hoxc4Q08624 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.56■□□□□ 0.4
Hoxc4Q08624 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.56■□□□□ 0.4
Hoxc4Q08624 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.56■□□□□ 0.4
Hoxc4Q08624 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxc4Q08624 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc4Q08624 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc4Q08624 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Hoxc4Q08624 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.55■□□□□ 0.4
Hoxc4Q08624 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.55■□□□□ 0.4
Hoxc4Q08624 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc4Q08624 Gm42545-201ENSMUST00000202755 922 ntBASIC17.55■□□□□ 0.4
Hoxc4Q08624 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc4Q08624 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.55■□□□□ 0.4
Hoxc4Q08624 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Hoxc4Q08624 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Hoxc4Q08624 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.55■□□□□ 0.4
Hoxc4Q08624 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxc4Q08624 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc4Q08624 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Hoxc4Q08624 Mir2861-201ENSMUST00000175539 82 ntBASIC17.54■□□□□ 0.4
Hoxc4Q08624 Gm37292-201ENSMUST00000192062 758 ntBASIC17.54■□□□□ 0.4
Hoxc4Q08624 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.54■□□□□ 0.4
Hoxc4Q08624 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hoxc4Q08624 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.54■□□□□ 0.4
Hoxc4Q08624 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc4Q08624 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxc4Q08624 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hoxc4Q08624 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.54■□□□□ 0.4
Hoxc4Q08624 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.54■□□□□ 0.4
Hoxc4Q08624 Iqck-206ENSMUST00000208658 2891 ntBASIC17.54■□□□□ 0.4
Hoxc4Q08624 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc4Q08624 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Hoxc4Q08624 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc4Q08624 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxc4Q08624 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.53■□□□□ 0.4
Hoxc4Q08624 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.53■□□□□ 0.4
Hoxc4Q08624 Mir6982-201ENSMUST00000184354 68 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms