Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Uba52P62984 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Uba52P62984 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Uba52P62984 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Uba52P62984 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.83■□□□□ 0.12
Uba52P62984 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.83■□□□□ 0.12
Uba52P62984 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Uba52P62984 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.83■□□□□ 0.12
Uba52P62984 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Uba52P62984 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Uba52P62984 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Uba52P62984 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Uba52P62984 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.82■□□□□ 0.12
Uba52P62984 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.82■□□□□ 0.12
Uba52P62984 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.82■□□□□ 0.12
Uba52P62984 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.82■□□□□ 0.12
Uba52P62984 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.82■□□□□ 0.12
Uba52P62984 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Uba52P62984 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Uba52P62984 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Uba52P62984 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Uba52P62984 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.81■□□□□ 0.12
Uba52P62984 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
Uba52P62984 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Uba52P62984 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Uba52P62984 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Uba52P62984 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.8■□□□□ 0.12
Uba52P62984 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.8■□□□□ 0.12
Uba52P62984 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.8■□□□□ 0.12
Uba52P62984 Gm27011-201ENSMUST00000182352 972 ntBASIC15.8■□□□□ 0.12
Uba52P62984 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Uba52P62984 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Uba52P62984 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Uba52P62984 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Uba52P62984 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Uba52P62984 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Uba52P62984 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.79■□□□□ 0.12
Uba52P62984 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Uba52P62984 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Uba52P62984 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Uba52P62984 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Uba52P62984 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
Uba52P62984 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Uba52P62984 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Uba52P62984 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Uba52P62984 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms