Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Ybx1P62960 Gm11643-201ENSMUST00000119578 864 ntBASIC18.76■□□□□ 0.59
Ybx1P62960 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ybx1P62960 Zfp783-201ENSMUST00000095946 670 ntBASIC18.76■□□□□ 0.59
Ybx1P62960 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ybx1P62960 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ybx1P62960 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.76■□□□□ 0.59
Ybx1P62960 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ybx1P62960 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Ybx1P62960 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ybx1P62960 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ybx1P62960 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.74■□□□□ 0.59
Ybx1P62960 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.74■□□□□ 0.59
Ybx1P62960 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ybx1P62960 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Ybx1P62960 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Gm43183-201ENSMUST00000200632 547 ntBASIC18.74■□□□□ 0.59
Ybx1P62960 Gm43799-201ENSMUST00000201845 579 ntBASIC18.74■□□□□ 0.59
Ybx1P62960 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ybx1P62960 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ybx1P62960 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ybx1P62960 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.73■□□□□ 0.59
Ybx1P62960 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.73■□□□□ 0.59
Ybx1P62960 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ybx1P62960 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ybx1P62960 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ybx1P62960 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ybx1P62960 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ybx1P62960 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ybx1P62960 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ybx1P62960 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.72■□□□□ 0.59
Ybx1P62960 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.72■□□□□ 0.59
Ybx1P62960 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.72■□□□□ 0.59
Ybx1P62960 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ybx1P62960 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ybx1P62960 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ybx1P62960 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ybx1P62960 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Ybx1P62960 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ybx1P62960 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ybx1P62960 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Ybx1P62960 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ybx1P62960 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.71■□□□□ 0.59
Ybx1P62960 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.71■□□□□ 0.59
Ybx1P62960 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Ybx1P62960 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ybx1P62960 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ybx1P62960 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.71■□□□□ 0.59
Ybx1P62960 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ybx1P62960 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.71■□□□□ 0.59
Ybx1P62960 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ybx1P62960 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.7■□□□□ 0.58
Ybx1P62960 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.7■□□□□ 0.58
Ybx1P62960 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ybx1P62960 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ybx1P62960 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Ybx1P62960 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ybx1P62960 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.69■□□□□ 0.58
Ybx1P62960 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ybx1P62960 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ybx1P62960 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ybx1P62960 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ybx1P62960 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ybx1P62960 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ybx1P62960 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Ybx1P62960 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.69■□□□□ 0.58
Ybx1P62960 Gm42545-201ENSMUST00000202755 922 ntBASIC18.69■□□□□ 0.58
Ybx1P62960 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.69■□□□□ 0.58
Ybx1P62960 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ybx1P62960 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ybx1P62960 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms