Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.63■□□□□ 0.25
Cdh11P55288 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cdh11P55288 Reep4-203ENSMUST00000226563 1444 ntBASIC16.62■□□□□ 0.25
Cdh11P55288 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Cdh11P55288 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.62■□□□□ 0.25
Cdh11P55288 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.62■□□□□ 0.25
Cdh11P55288 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.62■□□□□ 0.25
Cdh11P55288 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.62■□□□□ 0.25
Cdh11P55288 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cdh11P55288 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cdh11P55288 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cdh11P55288 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Gm13234-201ENSMUST00000120010 747 ntBASIC16.61■□□□□ 0.25
Cdh11P55288 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.61■□□□□ 0.25
Cdh11P55288 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.61■□□□□ 0.25
Cdh11P55288 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdh11P55288 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdh11P55288 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Cdh11P55288 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
Cdh11P55288 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdh11P55288 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Cdh11P55288 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cdh11P55288 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh11P55288 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cdh11P55288 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh11P55288 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh11P55288 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh11P55288 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.59■□□□□ 0.25
Cdh11P55288 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.59■□□□□ 0.25
Cdh11P55288 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh11P55288 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh11P55288 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh11P55288 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdh11P55288 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdh11P55288 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh11P55288 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh11P55288 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh11P55288 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh11P55288 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh11P55288 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Cdh11P55288 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh11P55288 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.58■□□□□ 0.25
Cdh11P55288 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh11P55288 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdh11P55288 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh11P55288 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cdh11P55288 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh11P55288 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh11P55288 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh11P55288 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh11P55288 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh11P55288 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh11P55288 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdh11P55288 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.57■□□□□ 0.24
Cdh11P55288 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh11P55288 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms