Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx2P48379 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx2P48379 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx2P48379 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx2P48379 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx2P48379 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx2P48379 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.12■□□□□ 0.65
Rfx2P48379 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rfx2P48379 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.12■□□□□ 0.65
Rfx2P48379 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.12■□□□□ 0.65
Rfx2P48379 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.12■□□□□ 0.65
Rfx2P48379 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Rfx2P48379 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rfx2P48379 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.12■□□□□ 0.65
Rfx2P48379 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.12■□□□□ 0.65
Rfx2P48379 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx2P48379 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx2P48379 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.11■□□□□ 0.65
Rfx2P48379 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.11■□□□□ 0.65
Rfx2P48379 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx2P48379 Gm2559-201ENSMUST00000201323 363 ntBASIC19.11■□□□□ 0.65
Rfx2P48379 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.11■□□□□ 0.65
Rfx2P48379 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Rfx2P48379 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx2P48379 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx2P48379 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Rfx2P48379 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx2P48379 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx2P48379 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx2P48379 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Rfx2P48379 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.1■□□□□ 0.65
Rfx2P48379 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Rfx2P48379 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfx2P48379 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfx2P48379 Gm10812-201ENSMUST00000099864 546 ntBASIC19.1■□□□□ 0.65
Rfx2P48379 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx2P48379 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx2P48379 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Rfx2P48379 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx2P48379 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.09■□□□□ 0.65
Rfx2P48379 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx2P48379 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfx2P48379 Gm12896-201ENSMUST00000118430 226 ntBASIC19.09■□□□□ 0.65
Rfx2P48379 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx2P48379 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.09■□□□□ 0.65
Rfx2P48379 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rfx2P48379 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.09■□□□□ 0.65
Rfx2P48379 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rfx2P48379 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx2P48379 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rfx2P48379 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.08■□□□□ 0.65
Rfx2P48379 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.08■□□□□ 0.64
Rfx2P48379 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Rfx2P48379 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Rfx2P48379 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx2P48379 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rfx2P48379 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rfx2P48379 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Rfx2P48379 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.07■□□□□ 0.64
Rfx2P48379 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.07■□□□□ 0.64
Rfx2P48379 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rfx2P48379 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx2P48379 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx2P48379 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx2P48379 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rfx2P48379 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rfx2P48379 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms