Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Col8a2P25318 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Col8a2P25318 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.26■□□□□ 0.03
Col8a2P25318 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col8a2P25318 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.26■□□□□ 0.03
Col8a2P25318 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.26■□□□□ 0.03
Col8a2P25318 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Col8a2P25318 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.26■□□□□ 0.03
Col8a2P25318 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Col8a2P25318 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.25■□□□□ 0.03
Col8a2P25318 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.25■□□□□ 0.03
Col8a2P25318 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col8a2P25318 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Col8a2P25318 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Col8a2P25318 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Col8a2P25318 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Col8a2P25318 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.24■□□□□ 0.03
Col8a2P25318 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.24■□□□□ 0.03
Col8a2P25318 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Col8a2P25318 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col8a2P25318 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Col8a2P25318 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col8a2P25318 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col8a2P25318 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Col8a2P25318 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col8a2P25318 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col8a2P25318 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.23■□□□□ 0.03
Col8a2P25318 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Col8a2P25318 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Col8a2P25318 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.23■□□□□ 0.03
Col8a2P25318 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col8a2P25318 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.22■□□□□ 0.03
Col8a2P25318 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.22■□□□□ 0.03
Col8a2P25318 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.22■□□□□ 0.03
Col8a2P25318 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.22■□□□□ 0.03
Col8a2P25318 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.22■□□□□ 0.03
Col8a2P25318 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Col8a2P25318 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.22■□□□□ 0.03
Col8a2P25318 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.22■□□□□ 0.03
Col8a2P25318 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col8a2P25318 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Col8a2P25318 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col8a2P25318 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col8a2P25318 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col8a2P25318 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col8a2P25318 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Col8a2P25318 Gm11927-201ENSMUST00000118472 759 ntBASIC15.21■□□□□ 0.03
Col8a2P25318 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.21■□□□□ 0.03
Col8a2P25318 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col8a2P25318 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col8a2P25318 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col8a2P25318 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col8a2P25318 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col8a2P25318 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col8a2P25318 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.21■□□□□ 0.03
Col8a2P25318 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.21■□□□□ 0.02
Col8a2P25318 Grk6-206ENSMUST00000224995 2971 ntBASIC15.21■□□□□ 0.02
Col8a2P25318 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col8a2P25318 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.2■□□□□ 0.02
Col8a2P25318 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col8a2P25318 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col8a2P25318 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col8a2P25318 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col8a2P25318 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.2■□□□□ 0.02
Col8a2P25318 Gm5643-201ENSMUST00000117081 966 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms