Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ApoeP08226 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ApoeP08226 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
ApoeP08226 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ApoeP08226 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.26■□□□□ 0.35
ApoeP08226 Smad6-203ENSMUST00000179458 273 ntBASIC17.26■□□□□ 0.35
ApoeP08226 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.26■□□□□ 0.35
ApoeP08226 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.26■□□□□ 0.35
ApoeP08226 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ApoeP08226 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ApoeP08226 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ApoeP08226 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ApoeP08226 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ApoeP08226 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ApoeP08226 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ApoeP08226 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ApoeP08226 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ApoeP08226 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ApoeP08226 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ApoeP08226 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ApoeP08226 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ApoeP08226 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.25■□□□□ 0.35
ApoeP08226 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ApoeP08226 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ApoeP08226 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.25■□□□□ 0.35
ApoeP08226 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ApoeP08226 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ApoeP08226 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ApoeP08226 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.24■□□□□ 0.35
ApoeP08226 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.24■□□□□ 0.35
ApoeP08226 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.24■□□□□ 0.35
ApoeP08226 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ApoeP08226 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ApoeP08226 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ApoeP08226 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ApoeP08226 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ApoeP08226 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ApoeP08226 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ApoeP08226 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ApoeP08226 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ApoeP08226 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.23■□□□□ 0.35
ApoeP08226 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ApoeP08226 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Tgds-204ENSMUST00000228543 1594 ntBASIC17.23■□□□□ 0.35
ApoeP08226 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ApoeP08226 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.22■□□□□ 0.35
ApoeP08226 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
ApoeP08226 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.22■□□□□ 0.35
ApoeP08226 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ApoeP08226 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.21■□□□□ 0.35
ApoeP08226 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.21■□□□□ 0.35
ApoeP08226 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ApoeP08226 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms