Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.41■□□□□ 0.7
TnfP06804 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.41■□□□□ 0.7
TnfP06804 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TnfP06804 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TnfP06804 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.4■□□□□ 0.7
TnfP06804 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.4■□□□□ 0.7
TnfP06804 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.4■□□□□ 0.7
TnfP06804 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.4■□□□□ 0.7
TnfP06804 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.4■□□□□ 0.7
TnfP06804 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TnfP06804 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TnfP06804 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TnfP06804 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TnfP06804 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.4■□□□□ 0.7
TnfP06804 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TnfP06804 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.4■□□□□ 0.7
TnfP06804 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TnfP06804 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TnfP06804 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TnfP06804 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.4■□□□□ 0.7
TnfP06804 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
TnfP06804 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TnfP06804 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TnfP06804 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TnfP06804 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TnfP06804 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TnfP06804 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.39■□□□□ 0.69
TnfP06804 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.39■□□□□ 0.69
TnfP06804 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TnfP06804 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TnfP06804 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TnfP06804 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TnfP06804 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TnfP06804 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TnfP06804 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TnfP06804 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TnfP06804 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TnfP06804 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TnfP06804 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TnfP06804 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TnfP06804 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TnfP06804 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.37■□□□□ 0.69
TnfP06804 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TnfP06804 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TnfP06804 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TnfP06804 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TnfP06804 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.35■□□□□ 0.69
TnfP06804 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TnfP06804 Gm6576-201ENSMUST00000169678 883 ntBASIC19.35■□□□□ 0.69
TnfP06804 Gm10138-203ENSMUST00000206952 366 ntBASIC19.35■□□□□ 0.69
TnfP06804 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.35■□□□□ 0.69
TnfP06804 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TnfP06804 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TnfP06804 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.35■□□□□ 0.69
TnfP06804 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TnfP06804 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.34■□□□□ 0.69
TnfP06804 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.34■□□□□ 0.69
TnfP06804 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.34■□□□□ 0.69
TnfP06804 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TnfP06804 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.34■□□□□ 0.69
TnfP06804 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TnfP06804 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TnfP06804 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TnfP06804 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TnfP06804 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TnfP06804 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.33■□□□□ 0.69
TnfP06804 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TnfP06804 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms