Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hbb-b1P02088 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hbb-b1P02088 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.95□□□□□ -0.34
Hbb-b1P02088 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hbb-b1P02088 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Haglr-201ENSMUST00000100000 2085 ntBASIC12.94□□□□□ -0.34
Hbb-b1P02088 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Hbb-b1P02088 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.94□□□□□ -0.34
Hbb-b1P02088 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hbb-b1P02088 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hbb-b1P02088 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.92□□□□□ -0.34
Hbb-b1P02088 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.92□□□□□ -0.34
Hbb-b1P02088 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Hbb-b1P02088 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.91□□□□□ -0.34
Hbb-b1P02088 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Hbb-b1P02088 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Hbb-b1P02088 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms