Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.35□□□□□ -0.27
TcraP01849 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.35□□□□□ -0.27
TcraP01849 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TcraP01849 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TcraP01849 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
TcraP01849 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.34□□□□□ -0.27
TcraP01849 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 Gm43530-201ENSMUST00000195920 274 ntBASIC13.34□□□□□ -0.27
TcraP01849 Rps24-207ENSMUST00000224568 714 ntBASIC13.34□□□□□ -0.27
TcraP01849 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TcraP01849 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TcraP01849 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TcraP01849 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TcraP01849 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
TcraP01849 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TcraP01849 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TcraP01849 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TcraP01849 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TcraP01849 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Gm9959-201ENSMUST00000068277 390 ntBASIC13.33□□□□□ -0.28
TcraP01849 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.33□□□□□ -0.28
TcraP01849 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TcraP01849 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TcraP01849 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.32□□□□□ -0.28
TcraP01849 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TcraP01849 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.32□□□□□ -0.28
TcraP01849 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TcraP01849 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TcraP01849 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TcraP01849 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.31□□□□□ -0.28
TcraP01849 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.31□□□□□ -0.28
TcraP01849 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
TcraP01849 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.31□□□□□ -0.28
TcraP01849 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TcraP01849 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TcraP01849 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TcraP01849 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TcraP01849 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.31□□□□□ -0.28
TcraP01849 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.3□□□□□ -0.28
TcraP01849 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TcraP01849 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TcraP01849 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms