Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.91□□□□□ -0.34
Sh2d1aO88890 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh2d1aO88890 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Gm42778-201ENSMUST00000199644 553 ntBASIC12.9□□□□□ -0.34
Sh2d1aO88890 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh2d1aO88890 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.9□□□□□ -0.35
Sh2d1aO88890 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sh2d1aO88890 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sh2d1aO88890 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Grk6-206ENSMUST00000224995 2971 ntBASIC12.89□□□□□ -0.35
Sh2d1aO88890 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.89□□□□□ -0.35
Sh2d1aO88890 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.89□□□□□ -0.35
Sh2d1aO88890 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d1aO88890 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.88□□□□□ -0.35
Sh2d1aO88890 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.88□□□□□ -0.35
Sh2d1aO88890 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d1aO88890 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.88□□□□□ -0.35
Sh2d1aO88890 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.87□□□□□ -0.35
Sh2d1aO88890 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.87□□□□□ -0.35
Sh2d1aO88890 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d1aO88890 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms