Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.45■□□□□ 0.38
Hcn1O88704 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.45■□□□□ 0.38
Hcn1O88704 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hcn1O88704 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hcn1O88704 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.44■□□□□ 0.38
Hcn1O88704 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hcn1O88704 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.44■□□□□ 0.38
Hcn1O88704 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.44■□□□□ 0.38
Hcn1O88704 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Hcn1O88704 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hcn1O88704 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Hcn1O88704 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.43■□□□□ 0.38
Hcn1O88704 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
Hcn1O88704 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.43■□□□□ 0.38
Hcn1O88704 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hcn1O88704 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Hcn1O88704 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.43■□□□□ 0.38
Hcn1O88704 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hcn1O88704 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn1O88704 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn1O88704 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn1O88704 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn1O88704 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Hcn1O88704 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn1O88704 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Hcn1O88704 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hcn1O88704 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn1O88704 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn1O88704 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn1O88704 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn1O88704 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.41■□□□□ 0.38
Hcn1O88704 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn1O88704 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.41■□□□□ 0.38
Hcn1O88704 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn1O88704 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hcn1O88704 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Hcn1O88704 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.4■□□□□ 0.38
Hcn1O88704 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hcn1O88704 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn1O88704 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn1O88704 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn1O88704 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hcn1O88704 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.4■□□□□ 0.38
Hcn1O88704 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn1O88704 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn1O88704 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn1O88704 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hcn1O88704 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn1O88704 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hcn1O88704 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hcn1O88704 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Hcn1O88704 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hcn1O88704 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Hcn1O88704 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hcn1O88704 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 Gm6420-201ENSMUST00000193885 723 ntBASIC17.39■□□□□ 0.37
Hcn1O88704 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.39■□□□□ 0.37
Hcn1O88704 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.39■□□□□ 0.37
Hcn1O88704 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.39■□□□□ 0.37
Hcn1O88704 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hcn1O88704 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.39■□□□□ 0.37
Hcn1O88704 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms