Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Gm6576-201ENSMUST00000169678 883 ntBASIC21.11■□□□□ 0.97
Sema3fO88632 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.11■□□□□ 0.97
Sema3fO88632 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.11■□□□□ 0.97
Sema3fO88632 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.11■□□□□ 0.97
Sema3fO88632 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3fO88632 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3fO88632 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3fO88632 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sema3fO88632 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3fO88632 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3fO88632 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.1■□□□□ 0.97
Sema3fO88632 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3fO88632 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.1■□□□□ 0.97
Sema3fO88632 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3fO88632 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3fO88632 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.09■□□□□ 0.97
Sema3fO88632 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.09■□□□□ 0.97
Sema3fO88632 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.09■□□□□ 0.97
Sema3fO88632 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3fO88632 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.08■□□□□ 0.97
Sema3fO88632 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sema3fO88632 Mir1199-201ENSMUST00000117015 119 ntBASIC21.08■□□□□ 0.97
Sema3fO88632 Mir7071-201ENSMUST00000184847 69 ntBASIC21.08■□□□□ 0.97
Sema3fO88632 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Sema3fO88632 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sema3fO88632 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.08■□□□□ 0.96
Sema3fO88632 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sema3fO88632 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sema3fO88632 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.08■□□□□ 0.96
Sema3fO88632 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sema3fO88632 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sema3fO88632 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3fO88632 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3fO88632 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3fO88632 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3fO88632 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3fO88632 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3fO88632 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.07■□□□□ 0.96
Sema3fO88632 Gm38285-201ENSMUST00000192928 922 ntBASIC21.07■□□□□ 0.96
Sema3fO88632 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3fO88632 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3fO88632 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.06■□□□□ 0.96
Sema3fO88632 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.06■□□□□ 0.96
Sema3fO88632 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Sema3fO88632 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sema3fO88632 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Sema3fO88632 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.06■□□□□ 0.96
Sema3fO88632 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.06■□□□□ 0.96
Sema3fO88632 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sema3fO88632 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.06■□□□□ 0.96
Sema3fO88632 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3fO88632 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3fO88632 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3fO88632 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3fO88632 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3fO88632 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3fO88632 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.05■□□□□ 0.96
Sema3fO88632 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3fO88632 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3fO88632 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sema3fO88632 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC21.04■□□□□ 0.96
Sema3fO88632 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Sema3fO88632 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Sema3fO88632 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.04■□□□□ 0.96
Sema3fO88632 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3fO88632 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sema3fO88632 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sema3fO88632 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms