Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cacna1hO88427 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Cacna1hO88427 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Cacna1hO88427 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Cacna1hO88427 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cacna1hO88427 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cacna1hO88427 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1hO88427 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1hO88427 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1hO88427 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1hO88427 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1hO88427 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1hO88427 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cacna1hO88427 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cacna1hO88427 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cacna1hO88427 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Cacna1hO88427 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1hO88427 Gm28659-201ENSMUST00000188013 759 ntBASIC17.83■□□□□ 0.44
Cacna1hO88427 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1hO88427 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cacna1hO88427 Gm13474-201ENSMUST00000122466 815 ntBASIC17.82■□□□□ 0.44
Cacna1hO88427 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.82■□□□□ 0.44
Cacna1hO88427 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.82■□□□□ 0.44
Cacna1hO88427 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cacna1hO88427 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cacna1hO88427 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1hO88427 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1hO88427 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1hO88427 Gm12085-201ENSMUST00000119263 940 ntBASIC17.82■□□□□ 0.44
Cacna1hO88427 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.82■□□□□ 0.44
Cacna1hO88427 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.82■□□□□ 0.44
Cacna1hO88427 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1hO88427 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cacna1hO88427 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1hO88427 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1hO88427 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cacna1hO88427 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.81■□□□□ 0.44
Cacna1hO88427 Gm7063-201ENSMUST00000186840 981 ntBASIC17.81■□□□□ 0.44
Cacna1hO88427 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.81■□□□□ 0.44
Cacna1hO88427 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cacna1hO88427 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cacna1hO88427 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.81■□□□□ 0.44
Cacna1hO88427 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cacna1hO88427 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cacna1hO88427 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cacna1hO88427 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1hO88427 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1hO88427 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.8■□□□□ 0.44
Cacna1hO88427 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.8■□□□□ 0.44
Cacna1hO88427 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1hO88427 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Cacna1hO88427 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1hO88427 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1hO88427 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.8■□□□□ 0.44
Cacna1hO88427 Mir1668-201ENSMUST00000184114 107 ntBASIC17.8■□□□□ 0.44
Cacna1hO88427 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.8■□□□□ 0.44
Cacna1hO88427 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1hO88427 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.79■□□□□ 0.44
Cacna1hO88427 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cacna1hO88427 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cacna1hO88427 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.79■□□□□ 0.44
Cacna1hO88427 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1hO88427 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.79■□□□□ 0.44
Cacna1hO88427 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cacna1hO88427 Gm27389-201ENSMUST00000183622 195 ntBASIC17.79■□□□□ 0.44
Cacna1hO88427 Gm18206-201ENSMUST00000207027 926 ntBASIC17.79■□□□□ 0.44
Cacna1hO88427 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.79■□□□□ 0.44
Cacna1hO88427 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms