Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.28■□□□□ 0.36
Rdh5O55240 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rdh5O55240 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rdh5O55240 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh5O55240 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh5O55240 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh5O55240 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh5O55240 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rdh5O55240 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.27■□□□□ 0.36
Rdh5O55240 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh5O55240 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh5O55240 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh5O55240 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rdh5O55240 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rdh5O55240 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.27■□□□□ 0.36
Rdh5O55240 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh5O55240 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.27■□□□□ 0.35
Rdh5O55240 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh5O55240 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh5O55240 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh5O55240 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh5O55240 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rdh5O55240 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.26■□□□□ 0.35
Rdh5O55240 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.26■□□□□ 0.35
Rdh5O55240 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Rdh5O55240 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.26■□□□□ 0.35
Rdh5O55240 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Rdh5O55240 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rdh5O55240 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.26■□□□□ 0.35
Rdh5O55240 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rdh5O55240 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.25■□□□□ 0.35
Rdh5O55240 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rdh5O55240 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.25■□□□□ 0.35
Rdh5O55240 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.25■□□□□ 0.35
Rdh5O55240 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.25■□□□□ 0.35
Rdh5O55240 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Rdh5O55240 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rdh5O55240 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh5O55240 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh5O55240 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rdh5O55240 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.24■□□□□ 0.35
Rdh5O55240 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.24■□□□□ 0.35
Rdh5O55240 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rdh5O55240 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.24■□□□□ 0.35
Rdh5O55240 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh5O55240 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rdh5O55240 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh5O55240 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh5O55240 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh5O55240 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rdh5O55240 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh5O55240 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh5O55240 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh5O55240 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rdh5O55240 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh5O55240 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh5O55240 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh5O55240 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh5O55240 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.23■□□□□ 0.35
Rdh5O55240 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.23■□□□□ 0.35
Rdh5O55240 Gm6365-201ENSMUST00000054711 744 ntBASIC17.23■□□□□ 0.35
Rdh5O55240 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rdh5O55240 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.23■□□□□ 0.35
Rdh5O55240 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Rdh5O55240 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.23■□□□□ 0.35
Rdh5O55240 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.23■□□□□ 0.35
Rdh5O55240 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Rdh5O55240 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms