Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm3375-201ENSMUST00000203929 796 ntBASIC20.22■□□□□ 0.83
Trdmt1O55055 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.22■□□□□ 0.83
Trdmt1O55055 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trdmt1O55055 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Trdmt1O55055 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdmt1O55055 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdmt1O55055 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdmt1O55055 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.21■□□□□ 0.83
Trdmt1O55055 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdmt1O55055 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.21■□□□□ 0.83
Trdmt1O55055 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdmt1O55055 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trdmt1O55055 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trdmt1O55055 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trdmt1O55055 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trdmt1O55055 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trdmt1O55055 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdmt1O55055 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdmt1O55055 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.21■□□□□ 0.83
Trdmt1O55055 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trdmt1O55055 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Trdmt1O55055 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trdmt1O55055 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trdmt1O55055 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trdmt1O55055 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trdmt1O55055 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trdmt1O55055 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trdmt1O55055 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trdmt1O55055 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trdmt1O55055 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trdmt1O55055 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trdmt1O55055 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trdmt1O55055 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trdmt1O55055 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.19■□□□□ 0.82
Trdmt1O55055 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trdmt1O55055 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trdmt1O55055 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trdmt1O55055 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trdmt1O55055 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trdmt1O55055 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trdmt1O55055 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trdmt1O55055 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Trdmt1O55055 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
Trdmt1O55055 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.18■□□□□ 0.82
Trdmt1O55055 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trdmt1O55055 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trdmt1O55055 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trdmt1O55055 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.17■□□□□ 0.82
Trdmt1O55055 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.17■□□□□ 0.82
Trdmt1O55055 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trdmt1O55055 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.17■□□□□ 0.82
Trdmt1O55055 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trdmt1O55055 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Trdmt1O55055 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trdmt1O55055 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trdmt1O55055 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trdmt1O55055 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trdmt1O55055 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trdmt1O55055 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trdmt1O55055 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Trdmt1O55055 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.16■□□□□ 0.82
Trdmt1O55055 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trdmt1O55055 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trdmt1O55055 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trdmt1O55055 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trdmt1O55055 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trdmt1O55055 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Trdmt1O55055 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.15■□□□□ 0.82
Trdmt1O55055 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.15■□□□□ 0.82
Trdmt1O55055 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.15■□□□□ 0.82
Trdmt1O55055 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.15■□□□□ 0.82
Trdmt1O55055 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trdmt1O55055 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trdmt1O55055 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.14■□□□□ 0.81
Trdmt1O55055 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trdmt1O55055 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trdmt1O55055 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Trdmt1O55055 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trdmt1O55055 Gm7889-201ENSMUST00000185591 958 ntBASIC20.14■□□□□ 0.81
Trdmt1O55055 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trdmt1O55055 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trdmt1O55055 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trdmt1O55055 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trdmt1O55055 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms