Protein–RNA interactions for Protein: O55033

Nck2, Cytoplasmic protein NCK2, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck2O55033 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nck2O55033 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nck2O55033 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.91■□□□□ 0.94
Nck2O55033 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.91■□□□□ 0.94
Nck2O55033 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.91■□□□□ 0.94
Nck2O55033 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nck2O55033 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nck2O55033 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.9■□□□□ 0.94
Nck2O55033 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Nck2O55033 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nck2O55033 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nck2O55033 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.89■□□□□ 0.93
Nck2O55033 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.89■□□□□ 0.93
Nck2O55033 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nck2O55033 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nck2O55033 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nck2O55033 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nck2O55033 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Gm11927-201ENSMUST00000118472 759 ntBASIC20.88■□□□□ 0.93
Nck2O55033 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Nck2O55033 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nck2O55033 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nck2O55033 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nck2O55033 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nck2O55033 Gm21814-202ENSMUST00000203277 873 ntBASIC20.87■□□□□ 0.93
Nck2O55033 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nck2O55033 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Nck2O55033 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.87■□□□□ 0.93
Nck2O55033 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nck2O55033 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Nck2O55033 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nck2O55033 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nck2O55033 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nck2O55033 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Nck2O55033 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.86■□□□□ 0.93
Nck2O55033 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.86■□□□□ 0.93
Nck2O55033 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Gm21362-201ENSMUST00000194272 928 ntBASIC20.86■□□□□ 0.93
Nck2O55033 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Nck2O55033 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.86■□□□□ 0.93
Nck2O55033 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nck2O55033 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Nck2O55033 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Nck2O55033 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Nck2O55033 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nck2O55033 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nck2O55033 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.85■□□□□ 0.93
Nck2O55033 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nck2O55033 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Nck2O55033 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nck2O55033 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Nck2O55033 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nck2O55033 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nck2O55033 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nck2O55033 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nck2O55033 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Nck2O55033 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nck2O55033 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Nck2O55033 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nck2O55033 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nck2O55033 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nck2O55033 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nck2O55033 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nck2O55033 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Nck2O55033 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nck2O55033 Gm30025-201ENSMUST00000218555 728 ntBASIC20.83■□□□□ 0.93
Nck2O55033 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nck2O55033 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nck2O55033 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
Nck2O55033 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nck2O55033 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nck2O55033 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms